3WRX

Crystal structure of helicase complex 1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 3WRX

Classification: TRANSFERASE

Total Structure Weight: 197875.16

Macromolecule Entities
Molecule Chains Length Organism Details
Tm-1 protein A, B 431 Solanum lycopersicum Gene Name(s): Tm-1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Replicase large subunit C, D 451 Tobacco mosaic virus EC#: 2.1.1 IUBMB 2.7.7.48 IUBMB 3.6.4.13 IUBMB
Fragment: UNP residues 666-1116
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AGS
Query on AGS

A, B, C, D PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
ATP-GAMMA-S; ADENOSINE 5'-(3-THIOTRIPHOSPHATE); ADENOSINE 5'- (GAMMA-THIOTRIPHOSPHATE); ADENOSINE-5'-DIPHOSPHATE MONOTHIOPHOSPHATE (Synonym)
C10 H16 N5 O12 P3 S
NLTUCYMLOPLUHL-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CS
Query on CS

A, B, C, D CESIUM ION
Cs
NCMHKCKGHRPLCM-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, C, D MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.196
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 85.21 α = 90.00
b = 133.71 β = 90.00
c = 195.22 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-02-27
  • Released Date: 2014-08-13
  • Deposition author(s): Matsumura, H., Katoh, E.

Revision History

  • Version 1_0: 2014-08-13

    Type: Initial release

  • Version 1_1: 2016-11-16

    Type: Database references

  • Version 1_2: 2017-11-08

    Type: Source and taxonomy, Structure summary