Structual basis for the recognition of Ubc13 by the Shigella flexneri effector OspI
3W31
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Immune System
    Structure Weight: 42066.82
    Molecule: ORF169b
    Polymer: 1 Type: protein Length: 220
    Chains: A
    Mutation: C62A
    Organism: Shigella flexneri
    Gene Names: ORF169b CP0209
    UniProtKB: Protein Feature View | Search PDB | Q8VSD5  
    Molecule: Ubiquitin-conjugating enzyme E2 N
    Polymer: 2 Type: protein Length: 155
    Chains: B
    EC#: 6.3.2.19   
    Organism: Homo sapiens
    Gene Names: Gene View for UBE2N BLU
    UniProtKB: Protein Feature View | Search PDB | P61088  
     
  •   Structure Validation Hide

    View the full validation report  

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Shigella flexneri   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    3W30    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    IOD
    Search 
    Download 
    IOD I
    IODIDE ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Nishide, A.,  Kim, M.,  Takagi, K.,  Sasakawa, C.,  Mizushima, T.

    Deposition:   2012-12-07
    Release:   2013-03-27
    Last Modified (REVDAT):   2013-07-17
     
  •   Revision History    Hide
    Mouse over text for details
    2013-07-17
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.96
    R-Value: 0.245 (work)
    R-Free: 0.284
    Space Group: P 3 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 119.24 α = 90.00 
    b = 119.24 β = 90.00 
    c = 69.99 γ = 120.00