3V9E

Structure of the L499M mutant of the laccase from B.aclada

Structural Biology Knowledgebase: 3V9E SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.200
  • R-Value Work: 0.163

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3V9E

Classification: OXIDOREDUCTASE

Total Structure Weight: 66429.93

Macromolecule Entities
Molecule Chains Length Organism Details
Laccase A 580 Botrytis aclada EC#: 1.10.3.2 IUBMB

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BMA
Query on BMA

A BETA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-RWOPYEJCSA-N
Ligand Explorer
 
JSmol
CU
Query on CU

A COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
GOL
Query on GOL

A GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
MAN
Query on MAN

A ALPHA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-PQMKYFCFSA-N
Ligand Explorer
 
JSmol
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.200
  • R-Value Work: 0.163
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 69.71 α = 90.00
b = 113.56 β = 108.74
c = 79.98 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-12-27
  • Released Date: 2013-01-23
  • Deposition author(s): Osipov, E.M., Polyakov, K.M., Tikhonova, T.V., Dorovatovsky, P.V., Ludwig, R., Kittl, R., Shleev, S.V., Popov, V.O.

Revision History

  • 2014-12-03
    Type: Entry title | Details: --
  • 2014-11-19
    Type: Citation | Details: Citation update