3UQZ

X-ray structure of DNA processing protein A (DprA) from Streptococcus pneumoniae

Structural Biology Knowledgebase: 3UQZ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.219

Literature

Macromolecules
Sequence Display for 3UQZ

Classification: DNA BINDING PROTEIN

Total Structure Weight: 96871.14

Macromolecule Entities
Molecule Chains Length Organism Details
DNA processing protein DprA A, B, C 288 Streptococcus pneumoniae Gene Name(s): SP_1266
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, C SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.219
  • Space Group: I 41 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 300.24 α = 90.00
b = 300.24 β = 90.00
c = 78.34 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-11-21
  • Released Date: 2012-08-29
  • Deposition author(s): Quevillon-Cheruel, S., Brooks, M.A., Li de la Sierra-Gallay, I.

Revision History

  • 2012-09-26
    Type: Citation | Details: Citation update