3SI7

The crystal structure of the NBD1 domain of the mouse CFTR protein, deltaF508 mutant


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.182

Literature

Macromolecules
Sequence Display for 3SI7

Classification: HYDROLASE

Total Structure Weight: 130441.08

Macromolecule Entities
Molecule Chains Length Organism Details
Cystic fibrosis transmembrane conductance regulator A, B, C, D 285 Mus musculus EC#: 3.6.3.49 IUBMB
Fragment: Nucleotide-binding domain 1, UNP residues 389-673
Mutation: ΔF508
Gene Name(s): Cftr Abcc7
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ATP
Query on ATP

A, B, C, D ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACT
Query on ACT

A, B, C, D ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B, C, D MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.182
  • Space Group: P 4 21 2

Unit Cell:

Length (Å) Angle (°)
a = 170.55 α = 90.00
b = 170.55 β = 90.00
c = 109.37 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-06-17
  • Released Date: 2012-02-01
  • Deposition author(s): Brautigam, C.A., Caspa, E., Thomas, P.J.

Revision History

  • 2013-01-23
    Type: Database references