3SDE

Crystal structure of a paraspeckle-protein heterodimer, PSPC1/NONO


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.183

Literature

Macromolecules
Sequence Display for 3SDE

Classification: RNA BINDING PROTEIN

Total Structure Weight: 60961.65

Macromolecule Entities
Molecule Chains Length Organism Details
Paraspeckle component 1 A 261 Homo sapiens Fragment: DBHS domain
Gene Name(s): PSPC1 Gene View PSP1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Non-POU domain-containing octamer-binding protein B 261 Homo sapiens Fragment: DBHS domain
Gene Name(s): NONO Gene View NRB54
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 90.90 α = 90.00
b = 67.18 β = 99.96
c = 94.08 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-06-09
  • Released Date: 2012-03-14
  • Deposition author(s): Passon, D.M., Lee, M., Bond, C.S.

Revision History

  • Version 1_0: 2012-03-14

    Type: Initial release

  • Version 1_1: 2012-03-28

    Type: Database references

  • Version 1_2: 2012-04-11

    Type: Database references