Download MendeleyThe structure of HCV NS3 helicase with inhibitor ITMN-3479
Mather, O., Cheng, R., Schonfield, D., Barker, J.To be published.
3RVB
The structure of HCV NS3 helicase (Heli-80) bound with inhibitor ITMN-3479
- PDB DOI: https://doi.org/10.2210/pdb3RVB/pdb
- Classification: HYDROLASE/HYDROLASE INHIBITOR
- Organism(s): Hepacivirus hominis
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2011-05-06 Released: 2014-09-24
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.287
- R-Value Work: 0.224
- R-Value Observed: 0.227
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| RNA helicase | 493 | Hepacivirus hominis | Mutation(s): 0 Gene Names: NS3 EC: 3.6.4.13 |  | |
UniProt | |||||
Find proteins for P26663 (Hepatitis C virus genotype 1b (isolate BK)) Explore P26663 Go to UniProtKB: P26663 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P26663 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| I79 Query on I79 | B [auth A] | {1-[(5-chloro-2-methyl-1-benzothiophen-3-yl)methyl]-6-(3,5-diaminophenyl)-1H-indol-3-yl}acetic acid C26 H22 Cl N3 O2 S PFDAXQGFXBAMGF-UHFFFAOYSA-N |  | ||
| CL Query on CL | E [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
| MG Query on MG | C [auth A], D [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.287
- R-Value Work: 0.224
- R-Value Observed: 0.227
- Space Group: P 31 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 92.354 | α = 90 |
| b = 92.354 | β = 90 |
| c = 104.462 | γ = 120 |
| Software Name | Purpose |
|---|---|
| CrystalClear | data collection |
| MOLREP | phasing |
| REFMAC | refinement |
| CrystalClear | data reduction |
| CrystalClear | data scaling |
Entry History
Deposition Data
- Released Date: 2014-09-24 Deposition Author(s): Mather, O., Cheng, R., Schonfield, D., Barker, J.
Revision History (Full details and data files)
- Version 1.0: 2014-09-24
Type: Initial release - Version 1.1: 2024-02-28
Changes: Data collection, Database references, Derived calculations
