3R89

Crystal structure of orotidine 5-phosphate decarboxylase from Anaerococcus prevotii DSM 20548

Structural Biology Knowledgebase: 3R89 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.84 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.158

Literature

Macromolecules
Sequence Display for 3R89

Classification: LYASE

Total Structure Weight: 66615.34

Macromolecule Entities
Molecule Chains Length Organism Details
Orotidine 5'-phosphate decarboxylase A, B 290 Anaerococcus prevotii EC#: 4.1.1.23 IUBMB
Gene Name(s): pyrF Apre_0783
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.84 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.158
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 39.51 α = 90.00
b = 108.85 β = 90.00
c = 138.17 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-03-23
  • Released Date: 2011-04-06
  • Deposition author(s): Chang, C., Tesar, C., Bearden, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4