3QTB

Structure of the universal stress protein from Archaeoglobus fulgidus in complex with dAMP

Structural Biology Knowledgebase: 3QTB SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.200

Literature

Macromolecules
Sequence Display for 3QTB

Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION

Total Structure Weight: 35187.66

Macromolecule Entities
Molecule Chains Length Organism Details
Uncharacterized protein A, B 155 Archaeoglobus fulgidus Gene Name(s): AF_0826
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
D5M
Query on D5M

A 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
C10 H14 N5 O6 P
KHWCHTKSEGGWEX-RRKCRQDMSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACT
Query on ACT

B ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 109.61 α = 90.00
b = 42.65 β = 116.82
c = 61.29 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-02-22
  • Released Date: 2011-03-30
  • Deposition author(s): Tkaczuk, K.L., Shumilin, I.A., Chruszcz, M., Cymborowski, M., Xu, X., Di Leo, R., Savchenko, A., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2013-06-26
    Type: Citation | Details: Citation update
  • 2013-04-17
    Type: Citation | Details: Citation update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4