3ORL

Mycobacterium tuberculosis PknB kinase domain L33D mutant (crystal form 3)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.211

Literature

Macromolecules
Sequence Display for 3ORL

Classification: TRANSFERASE

Total Structure Weight: 34098.79

Macromolecule Entities
Molecule Chains Length Organism Details
Serine/threonine protein kinase A 311 Mycobacterium tuberculosis Fragment: Kinase domain (UNP residues 1 to 308)
Mutation: L33D
Gene Name(s): pknB MRA_0016
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AGS
Query on AGS

A PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
ATP-GAMMA-S; ADENOSINE 5'-(3-THIOTRIPHOSPHATE); ADENOSINE 5'- (GAMMA-THIOTRIPHOSPHATE); ADENOSINE-5'-DIPHOSPHATE MONOTHIOPHOSPHATE (Synonym)
C10 H16 N5 O12 P3 S
NLTUCYMLOPLUHL-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.211
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 40.19 α = 90.00
b = 50.63 β = 90.00
c = 132.76 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-09-07
  • Released Date: 2010-12-15
  • Deposition author(s): Echols, N., Lombana, T.N., Thomsen, N.D., Ng, H.-L., Alber, T., TB Structural Genomics Consortium (TBSGC)

Revision History

  • Version 1_0: 2010-12-15

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance