3LU2

Structure of lmo2462, a Listeria monocytogenes amidohydrolase family putative dipeptidase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.185
  • R-Value Work: 0.152

Literature

Macromolecules
Sequence Display for 3LU2

Classification: HYDROLASE

Total Structure Weight: 71084.09

Macromolecule Entities
Molecule Chains Length Organism Details
Lmo2462 protein A, B 311 Listeria monocytogenes Gene Name(s): lmo2462
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 179.09 α = 90.00
b = 179.09 β = 90.00
c = 46.41 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-02-16
  • Released Date: 2010-03-09
  • Deposition author(s): Anderson, S.M., Wawrzak, Z., Onopriyenko, O., Hasseman, J., Edwards, A., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • Version 1_0: 2010-03-09

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2011-12-07

    Type: Structure summary

  • Version 1_3: 2017-11-01

    Type: Refinement description