3L0D

Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Bartonella henselae with bound NAD


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.249
  • R-Value Work: 0.202

Literature

Macromolecules
Sequence Display for 3L0D

Classification: OXIDOREDUCTASE

Total Structure Weight: 78344.21

Macromolecule Entities
Molecule Chains Length Organism Details
Glyceraldehyde 3-phosphate dehydrogenase A, B 356 Bartonella henselae EC#: 1.2.1.12 IUBMB
Gene Name(s): gap BM1374164_01482
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAD
Query on NAD

A, B NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 91.78 α = 90.00
b = 91.78 β = 90.00
c = 161.40 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-12-09
  • Released Date: 2009-12-29
  • Deposition author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History

  • 2011-07-13
    Type: Advisory, Refinement description, Version format compliance