3KZW

Crystal structure of cytosol aminopeptidase from Staphylococcus aureus COL


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.221

Literature

Macromolecules
Sequence Display for 3KZW

Classification: HYDROLASE

Total Structure Weight: 686355.81

Macromolecule Entities
Molecule Chains Length Organism Details
Cytosol aminopeptidase A, B, C..., D, E, F, G, H, I, J, K, LA, B, C, D, E, F, G, H, I, J, K, L 515 Staphylococcus aureus EC#: 3.4.11.1 IUBMB
Gene Name(s): SACOL0945
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A, D, G, J PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B, C, D, E, F, G, H, I, J, K, L CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A, B, C, D, E, F, G, H, I, J, K, L SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 143.38 α = 90.00
b = 154.73 β = 90.00
c = 340.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-12-08
  • Released Date: 2010-01-12
  • Deposition author(s): Hattne, J., Dubrovska, I., Halavaty, A., Minasov, G., Scott, P., Shuvalova, L., Winsor, J., Otwinowski, Z., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • 2011-07-13
    Type: Advisory, Source and taxonomy, Version format compliance