3KY7

2.35 Angstrom resolution crystal structure of a putative tRNA (guanine-7-)-methyltransferase (trmD) from Staphylococcus aureus subsp. aureus MRSA252


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.209

Literature

Macromolecules
Sequence Display for 3KY7

Classification: TRANSFERASE

Total Structure Weight: 30853.79

Macromolecule Entities
Molecule Chains Length Organism Details
tRNA (guanine-N(1)-)-methyltransferase A 269 Staphylococcus aureus EC#: 2.1.1.31 IUBMB
Gene Name(s): trmD SAR1216
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
OCS
Query on OCS
A L-PEPTIDE LINKING C3 H7 N O5 S CYS

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 125.18 α = 90.00
b = 125.18 β = 90.00
c = 125.18 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-12-04
  • Released Date: 2009-12-22
  • Deposition author(s): Halavaty, A.S., Minasov, G., Winsor, J., Dubrovska, I., Shuvalova, L., See, R., Zoraghi, R., Reiner, N., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • Version 1_0: 2009-12-22

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Version format compliance

  • Version 1_2: 2017-11-01

    Type: Refinement description