3KPB

Crystal Structure of the CBS domain pair of protein MJ0100 in complex with 5 -methylthioadenosine and S-adenosyl-L-methionine.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.202

Literature

Macromolecules
Sequence Display for 3KPB

Classification: UNKNOWN FUNCTION

Total Structure Weight: 55798.84

Macromolecule Entities
Molecule Chains Length Organism Details
Uncharacterized protein MJ0100 A, B, C, D 122 Methanocaldococcus jannaschii Fragment: residues 388-509
Gene Name(s): MJ0100
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SAM
Query on SAM

A, C, D S-ADENOSYLMETHIONINE
C15 H22 N6 O5 S
MEFKEPWMEQBLKI-FCKMPRQPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

B, C, D GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.202
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 46.99 α = 80.11
b = 49.70 β = 75.85
c = 59.12 γ = 64.04

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-11-16
  • Released Date: 2010-01-12
  • Deposition author(s): Lucas, M., Oyenarte, I., Garcia, I.G., Arribas, E.A., Encinar, J.A., Kortazar, D., Fernandez, J.A., Mato, J.M., Martinez-Cruz, L.A.

Revision History

  • 2011-07-13
    Type: Version format compliance