3H8J

Native T4 RNase H in the absence of divalent metal ions


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.192

Literature

Macromolecules
Sequence Display for 3H8J

Classification: HYDROLASE

Total Structure Weight: 35729.97

Macromolecule Entities
Molecule Chains Length Organism Details
Ribonuclease H A 305 Enterobacteria phage t4 sensu lato EC#: 3.1.26.4 IUBMB
Gene Name(s): rnh 33.2 das
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.192
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 36.26 α = 90.00
b = 86.46 β = 92.04
c = 57.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-04-29
  • Released Date: 2010-05-12
  • Deposition author(s): Tomanicek, S.J., Mueser, T.C.

Revision History

  • Version 1_0: 2010-05-12

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance