3GOS

The crystal structure of 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase from Yersinia pestis CO92


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.272
  • R-Value Work: 0.227

Literature

Macromolecules
Sequence Display for 3GOS

Classification: TRANSFERASE

Total Structure Weight: 90580.23

Macromolecule Entities
Molecule Chains Length Organism Details
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase A, B, C 276 Yersinia pestis EC#: 2.3.1.117 IUBMB
Gene Name(s): dapD YPO1041 y3140 YP_2810
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.272
  • R-Value Work: 0.227
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 57.79 α = 90.00
b = 69.69 β = 105.28
c = 106.45 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-03-19
  • Released Date: 2009-05-12
  • Deposition author(s): Zhang, R., Maltseva, N., Kwon, K., Anderson, W., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • 2011-07-13
    Type: Advisory, Version format compliance