3EGJ

N-acetylglucosamine-6-phosphate deacetylase from Vibrio cholerae.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.189

Literature

Macromolecules
Sequence Display for 3EGJ

Classification: HYDROLASE

Total Structure Weight: 82853.52

Macromolecule Entities
Molecule Chains Length Organism Details
N-acetylglucosamine-6-phosphate deacetylase A, B 381 Vibrio cholerae EC#: 3.5.1.25 IUBMB
Gene Name(s): nagA VC_0994
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NI
Query on NI

A, B NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 77.00 α = 90.00
b = 77.00 β = 90.00
c = 282.55 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-09-10
  • Released Date: 2008-09-23
  • Deposition author(s): Osipiuk, J., Maltseva, N., Stam, J., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • Version 1_0: 2008-09-23

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Derived calculations, Version format compliance

  • Version 1_2: 2017-10-25

    Type: Refinement description