Macromolecules
Sequence Display for 3E3N

Classification: TRANSFERASE

Total Structure Weight: 784469.31

Macromolecule Entities
Molecule Chains Length Organism Details
Glycogen phosphorylase, muscle form A, B, C..., D, E, F, G, HA, B, C, D, E, F, G, H 842 Oryctolagus cuniculus EC#: 2.4.1.1 IUBMB
Gene Name(s): PYGM Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AMP
Query on AMP

A, B, C, D, E, F, G, H ADENOSINE MONOPHOSPHATE
C10 H14 N5 O7 P
UDMBCSSLTHHNCD-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B, C, D, E, F, G, H SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
LLP
Query on LLP
A, B, C, D, E, F, G, H L-PEPTIDE LINKING C14 H22 N3 O7 P LYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.192
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 119.02 α = 90.00
b = 188.08 β = 108.92
c = 175.91 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-08-07
  • Released Date: 2009-08-18
  • Deposition author(s): Leonidas, D.D., Zographos, S.E., Oikonomakos, N.G.

Revision History

  • Version 1_0: 2009-08-18

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Refinement description, Version format compliance

  • Version 1_2: 2012-03-21

    Type: Atomic model

  • Version 1_3: 2017-10-25

    Type: Refinement description