3DR2

Structural and Functional Analyses of XC5397 from Xanthomonas campestris: A Gluconolactonase Important in Glucose Secondary Metabolic Pathways


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.67 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.211

Literature

Macromolecules
Sequence Display for 3DR2

Classification: HYDROLASE

Total Structure Weight: 66784.71

Macromolecule Entities
Molecule Chains Length Organism Details
Exported gluconolactonase A, B 305 Xanthomonas campestris EC#: 3.1.1.17 IUBMB
Gene Name(s): gnl1 xcc-b100_0569
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.67 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.211
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 115.54 α = 90.00
b = 89.74 β = 127.71
c = 85.23 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-07-10
  • Released Date: 2008-10-07
  • Deposition author(s): Chen, C.-N., Chin, K.-H., Wang, A.H.-J., Chou, S.H.

Revision History

  • Version 1_0: 2008-10-07

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance