ZP-N domain of mammalian sperm receptor ZP3 (crystal form II)
3D4G
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Cell Adhesion
    Structure Weight: 427297.12
    Molecule: Maltose-binding periplasmic protein, LINKER, Zona pellucida protein 3
    Polymer: 1 Type: protein Length: 481
    Chains: A, B, C, D, E, F, G, H
    Fragment: ZP3 ZP-N domain, UNP residues 27-393, UNP residues 42-143
    Mutation: I3T, E360A, K363A, D364A, R368N
    Details: This protein is a chimera. Residues 2-368 are from E. COLI maltose binding protein (MBP), correspond to residues 27-393 of swiss-prot database entry P0AEX9 and contain mutations I3T, E360A, K363A, D364A, R368N (corresponding to I28T, E385A, K388A, D389A AND R393N in P0AEX9). Residues 372-473 are from mouse ZP3 protein and correspond to residues 42-143 of swiss-prot database entry P10761.
    Organism: Mus musculus unidentified Escherichia coli K-12
    Gene Names: Zp3 Zp-3 Zpc
    UniProtKB: Protein Feature View | Search PDB | P10761  
     
  •   Structure Validation Hide

    View the full validation report  

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
     
  •   Related PDB Entries Hide
    Identifier Details
    3D4C   Crystal form I of the same protein 
    3EF7   Crystal form III of the same protein 
    3NK3    
    3NK4    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CA
    Search 
    Download 
    CA Ca
    CALCIUM ION
    MAL
    Search 
    Download 
    MAL C12 H22 O11
    MALTOSE
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Jovine, L.,  Monne, M.

    Deposition:   2008-05-14
    Release:   2008-12-02
    Last Modified (REVDAT):   2010-11-10
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.30
    R-Value: 0.202 (obs.)
    R-Free: 0.227
    Space Group: P 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 91.05 α = 89.99 
    b = 91.96 β = 90.18 
    c = 140.48 γ = 89.98