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Crystal Structure of Lysine Riboswitch Bound to Lysine
 
 
DOI:10.2210/pdb3d0u/pdb   NDB ID: UR0144
3D0U
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: RNA
    Structure Weight: 53496.00
     
    Molecule:Lysine Riboswitch RNA
    Polymer:1Type:polyribonucleotideLength:161
    Chains:A
    Fragment:Ligand binding domain
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    IRI     IRIDIUM HEXAMMINE ION H18 Ir N6 3DLigand Explorer Link out to Ligand Expos:IRI Link out to SuperLigands:IRI Link out to SuperHapten:IRI
    LYS     LYSINE C6 H15 N2 O2 3DLigand Explorer Link out to Ligand Expos:LYS Link out to SuperLigands:LYS Link out to SuperHapten:LYS
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    LYS LYSINE(type: lPeptideLinking) C6 H15 N2 O2 Link out to Ligand Expos:LYS Link out to SuperLigands:LYS Link out to SuperHapten:LYS 2D
     
     
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Biological assembly assigned by authors and generated by PISA (software)
 
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Garst, A.D.,   Heroux, A.,   Rambo, R.P.,   Batey, R.T.

    Deposition:   2008-05-02
    Release:   2008-07-01
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors
    View a histogram of Resolution Resolution[Å]: 2.80
    R-Value: 0.184 (obs.)
    R-Free: 0.209
    Space Group: P 32
    Unit Cell:
      Length [Å] Angles [°]
    a = 119.82 α = 90.00 
    b = 119.82 β = 90.00 
    c = 58.74 γ = 120.00