3CFH

Photoswitchable red fluorescent protein psRFP, off-state


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.230 
  • R-Value Work: 0.202 
  • R-Value Observed: 0.204 

wwPDB Validation   3D Report Full Report


This is version 1.4 of the entry. See complete history


Literature

Structure of red fluorescent protein asRFP

Gundel, S.Kachalova, G.S.Oswald, F.Fuchs, J.Bartunik, H.D.Nienhaus, G.U.Wiedenmann, J.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
GFP-like photoswitchable fluorescent proteinA [auth L],
C [auth M],
E [auth R],
G [auth S]
62Anemonia sulcataMutation(s): 0 
UniProt
Find proteins for Q9GZ28 (Anemonia sulcata)
Explore Q9GZ28 
Go to UniProtKB:  Q9GZ28
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9GZ28
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
GFP-like photoswitchable fluorescent proteinB [auth A],
D [auth B],
F [auth G],
H
167Anemonia sulcataMutation(s): 1 
UniProt
Find proteins for Q9GZ28 (Anemonia sulcata)
Explore Q9GZ28 
Go to UniProtKB:  Q9GZ28
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9GZ28
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Modified Residues  2 Unique
IDChains TypeFormula2D DiagramParent
CME
Query on CME
B [auth A],
D [auth B],
F [auth G],
H
L-PEPTIDE LINKINGC5 H11 N O3 S2CYS
NRQ
Query on NRQ
B [auth A],
D [auth B],
F [auth G],
H
L-PEPTIDE LINKINGC16 H17 N3 O4 SMET, TYR, GLY
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.230 
  • R-Value Work: 0.202 
  • R-Value Observed: 0.204 
  • Space Group: C 2 2 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 97.819α = 90
b = 97.851β = 90
c = 241.827γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
MAR345dtbdata collection
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2009-03-10
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2021-11-10
    Changes: Advisory, Database references, Derived calculations
  • Version 1.3: 2023-11-01
    Changes: Data collection, Refinement description
  • Version 1.4: 2023-11-15
    Changes: Data collection