3BLC

Crystal structure of the periplasmic domain of the Escherichia Coli YIDC

Structural Biology Knowledgebase: 3BLC SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.249
  • R-Value Work: 0.212

Literature

Macromolecules
Sequence Display for 3BLC

Classification: CHAPERONE PROTEIN TRANSPORT

Total Structure Weight: 71928.60

Macromolecule Entities
Molecule Chains Length Organism Details
Inner membrane protein oxaA A, B 330 Escherichia coli Fragment: UNP residues 26-340
Mutation: E228A, K229A, E231A, K232A, K234A
Gene Name(s): yidC b3705 JW3683
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.249
  • R-Value Work: 0.212
  • Space Group: I 41 2 2

Unit Cell:

Length (Å) Angle (°)
a = 126.13 α = 90.00
b = 126.13 β = 90.00
c = 288.46 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-12-10
  • Released Date: 2007-12-25
  • Deposition author(s): Paetzel, M., Oliver, D.C.

Revision History

  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4