3BGV

Crystal structure of mRNA cap guanine-N7 methyltransferase in complex with SAH


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.294
  • R-Value Work: 0.221

Literature

Macromolecules
Sequence Display for 3BGV

Classification: TRANSFERASE

Total Structure Weight: 148630.48

Macromolecule Entities
Molecule Chains Length Organism Details
mRNA cap guanine-N7 methyltransferase A, B, C, D 313 Homo sapiens EC#: 2.1.1.56 IUBMB
Fragment: Residues 165-476
Gene Name(s): RNMT Gene View KIAA0398
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SAH
Query on SAH

C S-ADENOSYL-L-HOMOCYSTEINE
C14 H20 N6 O5 S
ZJUKTBDSGOFHSH-WFMPWKQPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.294
  • R-Value Work: 0.221
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 77.79 α = 90.00
b = 99.67 β = 90.00
c = 167.78 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-11-27
  • Released Date: 2007-12-04
  • Deposition author(s): Lunin, V.V., Wu, H., Zeng, H., Antoshenko, T., MacKenzie, F., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Min, J., Plotnikov, A.N., Structural Genomics Consortium (SGC)

Revision History

  • 2011-07-13
    Type: Version format compliance