3AI5

Crystal structure of yeast enhanced green fluorescent protein-ubiquitin fusion protein


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.209
  • R-Value Work: 0.179

Literature

Macromolecules
Sequence Display for 3AI5

Classification: Fluorescent Protein transcription

Total Structure Weight: 35061.60

Macromolecule Entities
Molecule Chains Length Organism Details
yeast enhanced green fluorescent protein,Ubiquitin A 309 Aequorea victoria Mus musculus Fragment: residues 1-230 for yeast enhanced green fluorescent protein,residues 1-74 for Ubiquitin
Gene Name(s): GFP Uba52 Ubcep2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CR2
Query on CR2
A L-PEPTIDE LINKING C13 H13 N3 O4 GLY , TYR , GLY

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.209
  • R-Value Work: 0.179
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 92.51 α = 90.00
b = 65.65 β = 130.34
c = 70.22 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-05-10
  • Released Date: 2010-09-29
  • Deposition author(s): Suzuki, N., Wakatsuki, S., Kawasaki, M.

Revision History

  • Version 1_0: 2010-09-29

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2017-06-14

    Type: Database references, Source and taxonomy, Structure summary