2ZY9

Improved crystal structure of magnesium transporter MgtE

Structural Biology Knowledgebase: 2ZY9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.94 Å
  • R-Value Free: 0.295
  • R-Value Work: 0.255

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2ZY9

Classification: membrane protien metal transport

Total Structure Weight: 105300.41

Macromolecule Entities
Molecule Chains Length Organism Details
Mg2+ transporter MgtE A, B 473 Thermus thermophilus Gene Name(s): TTHA1060
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: ALPHA-HELICAL

Subgroup Name: Channels: Other Ion Channels

Protein Name: MgtE Mg2+ Transporter


Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.94 Å
  • R-Value Free: 0.295
  • R-Value Work: 0.255
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 135.36 α = 90.00
b = 76.53 β = 102.17
c = 160.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-01-19
  • Released Date: 2009-12-01
  • Deposition author(s): Nureki, O., Ishitani, R., Hattori, M.

Revision History

  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4