2ZKM

Crystal Structure of Phospholipase C Beta 2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.62 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 2ZKM

Classification: HYDROLASE

Total Structure Weight: 91074.00

Macromolecule Entities
Molecule Chains Length Organism Details
1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2 X 799 Homo sapiens EC#: 3.1.4.11 IUBMB
Fragment: residues 1-799 (PH-C2 domains)
Gene Name(s): PLCB2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

X CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.62 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.196
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 80.40 α = 90.00
b = 86.38 β = 90.00
c = 147.45 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-03-26
  • Released Date: 2008-08-12
  • Deposition author(s): Hicks, S.N., Jezyk, M.R., Gershberg, S., Seifert, J.P., Harden, T.K., Sondek, J.

Revision History

  • Version 1_0: 2008-08-12

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2017-10-11

    Type: Refinement description