2Z5Y

Crystal Structure of Human Monoamine Oxidase A (G110A) with Harmine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.17 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.193

Literature

Macromolecules
Sequence Display for 2Z5Y

Classification: OXIDOREDUCTASE

Total Structure Weight: 59706.30

Macromolecule Entities
Molecule Chains Length Organism Details
Amine oxidase [flavin-containing] A A 513 Homo sapiens EC#: 1.4.3.4 IUBMB
Fragment: RESIDUES 12-524
Mutation: G110A
Gene Name(s): MAOA Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: MONOTOPIC MEMBRANE PROTEINS

Subgroup Name: Oxidases

Protein Name: Monoamine Oxidase A with bound Clorglycine


Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DCX
Query on DCX

A DECYL(DIMETHYL)PHOSPHINE OXIDE
DIMETHYLDECYLPHOSPHINE OXIDE (Synonym)
C12 H27 O P
GSVLCKASFMVUSW-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
HRM
Query on HRM

A 7-METHOXY-1-METHYL-9H-BETA-CARBOLINE
HARMINE,,4-B]INDOL (Synonym)
C13 H12 N2 O
BXNJHAXVSOCGBA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
HRM Ki: 5 - 17 nM (99) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.17 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.193
  • Space Group: C 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 135.55 α = 90.00
b = 217.36 β = 90.00
c = 54.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-07-20
  • Released Date: 2008-04-01
  • Deposition author(s): Son, S.Y., Ma, J., Yoshimura, M., Tsukihara, T.

Revision History

  • Version 1_0: 2008-04-01

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance