2YJE

OLIGOMERIC ASSEMBLY OF ACTIN BOUND TO MRTF-A

Structural Biology Knowledgebase: 2YJE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.235

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2YJE

Classification: MOTOR PROTEIN

Total Structure Weight: 144855.31

Macromolecule Entities
Molecule Chains Length Organism Details
ACTIN, ALPHA SKELETAL MUSCLE A, B, C 377 Oryctolagus cuniculus Gene Name(s): ACTA1 Gene View ACTA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
MKL/MYOCARDIN-LIKE PROTEIN 1 M 137 Mus musculus Fragment: RPEL DOMAIN, RESIDUES 16-142
Gene Name(s): Mkl1 Bsac
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ATP
Query on ATP

A, B, C ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
LAB
Query on LAB

A, B, C LATRUNCULIN B
C20 H29 N O5 S
NSHPHXHGRHSMIK-JRIKCGFMSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B, C MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.235
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 90.93 α = 90.00
b = 90.93 β = 90.00
c = 321.61 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-05-19
  • Released Date: 2011-07-06
  • Deposition author(s): Mouilleron, S., Langer, C.A., Guettler, S., Mcdonald, N.Q., Treisman, R.

Revision History

  • 2011-11-16
    Type: Citation | Details: JRNL
  • 2011-11-16
    Type: Version format compliance | Details: REMARK 4
  • 2011-11-16
    Type: Other | Details: REMARK 900