2Y0C

BceC mutation Y10S


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.163

Literature

Macromolecules
Sequence Display for 2Y0C

Classification: OXIDOREDUCTASE

Total Structure Weight: 213515.52

Macromolecule Entities
Molecule Chains Length Organism Details
UDP-GLUCOSE DEHYDROGENASE A, B, C, D 478 Burkholderia cepacia EC#: 1.1.1.22 IUBMB
Mutation: Y10S
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UGA
Query on UGA

A, B, C, D URIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID
UDP-GLUCURONIC ACID (Synonym)
C15 H22 N2 O18 P2
HDYANYHVCAPMJV-LXQIFKJMSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
TRS
Query on TRS

A 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER (Synonym)
C4 H12 N O3
LENZDBCJOHFCAS-UHFFFAOYSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B, C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, B, C, D GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACT
Query on ACT

A, B, C, D ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.163
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 97.36 α = 90.00
b = 108.62 β = 90.00
c = 187.46 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-12-02
  • Released Date: 2011-07-27
  • Deposition author(s): Rocha, J., Popescu, A.O., Borges, P., Mil-Homens, D., Sa-Correia, I., Fialho, A.M., Frazao, C.

Revision History

  • Version 1_0: 2011-07-27

    Type: Initial release