2XQ0

STRUCTURE OF YEAST LTA4 HYDROLASE IN COMPLEX WITH BESTATIN

Structural Biology Knowledgebase: 2XQ0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.96 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.190

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2XQ0

Classification: HYDROLASE

Total Structure Weight: 73484.51

Macromolecule Entities
Molecule Chains Length Organism Details
LEUKOTRIENE A-4 HYDROLASE A 632 Saccharomyces cerevisiae EC#: 3.3.2.6 IUBMB
Fragment: RESIDUES 40-671
Mutation: I328L, G670K
Gene Name(s): LAP2 YNL045W N2535
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BES
Query on BES

A 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)- 4-METHYL-PENTANOIC ACID
BESTATIN (Synonym)
C16 H24 N2 O4
VGGGPCQERPFHOB-RDBSUJKOSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.96 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.190
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 58.64 α = 90.00
b = 99.87 β = 90.00
c = 112.65 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-08-31
  • Released Date: 2010-12-29
  • Deposition author(s): Helgstrand, C., Hasan, M., Usyal, H., Haeggstrom, J.Z., Thunnissen, M.M.G.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4