2VIT

INFLUENZA VIRUS HEMAGGLUTININ, MUTANT WITH THR 155 REPLACED BY ILE, COMPLEXED WITH A NEUTRALIZING ANTIBODY

Structural Biology Knowledgebase: 2VIT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.25 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.188

Literature

Macromolecules
Sequence Display for 2VIT

Classification: COMPLEX (HEMAGGLUTININ / IMMUNOGLOBULIN)

Total Structure Weight: 77749.41

Macromolecule Entities
Molecule Chains Length Organism Details
IMMUNOGLOBULIN (IGG1, LAMBDA) A 210 Mus musculus Fragment: FAB FRAGMENT
IMMUNOGLOBULIN (IGG1, LAMBDA) B 221 Mus musculus Fragment: FAB FRAGMENT
Mutation: K3Q, Q5K, S28L, T30I, Y32N, H63L, F69I, N83K, L92M, H102Y, G103D, L117S, A122S, S135P
Gene Name(s): Igh
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
HEMAGGLUTININ C 282 Influenza a virus Fragment: PROTEOLYTIC FRAGMENT "HA TOP" CONTAINING HA1 RESIDUES 28 - 328
Mutation: N81D, T155I, N165D, N285D
Gene Name(s): HA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, C ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.25 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.188
  • Space Group: P 61 2 2

Unit Cell:

Length (Å) Angle (°)
a = 85.50 α = 90.00
b = 85.50 β = 90.00
c = 515.00 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-12-22
  • Released Date: 1998-04-29
  • Deposition author(s): Bizebard, T., Fleury, D., Gigant, B., Wharton, S.A., Skehel, J.J., Knossow, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4