2VGL

AP2 CLATHRIN ADAPTOR CORE

Structural Biology Knowledgebase: 2VGL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.339
  • R-Value Work: 0.261

Literature

Macromolecules
Sequence Display for 2VGL

Classification: PROTEIN TRANSPORT

Total Structure Weight: 204036.80

Macromolecule Entities
Molecule Chains Length Organism Details
ADAPTOR PROTEIN COMPLEX AP-2, ALPHA 2 SUBUNIT A 621 Rattus norvegicus Fragment: 1-621
Gene Name(s): Ap2a2 Adtab
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
AP-2 COMPLEX SUBUNIT BETA-1 B 591 Homo sapiens Fragment: 1-591
Gene Name(s): AP2B1 Gene View ADTB2 CLAPB1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
AP-2 COMPLEX SUBUNIT MU-1 M 435 Rattus norvegicus Gene Name(s): Ap2m1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
AP-2 COMPLEX SUBUNIT SIGMA-1 S 142 Mus musculus Gene Name(s): Ap2s1 Ap17 Claps2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IHP
Query on IHP

A INOSITOL HEXAKISPHOSPHATE
C6 H18 O24 P6
IMQLKJBTEOYOSI-GPIVLXJGSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.339
  • R-Value Work: 0.261
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 121.75 α = 90.00
b = 121.75 β = 90.00
c = 258.12 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-11-14
  • Released Date: 2007-12-25
  • Deposition author(s): Owen, D.J., Collins, B.M., Mccoy, A.J., Evans, P.R.
  • Previous versions: 1GW5

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4