2UZ1

1.65 ANGSTROM STRUCTURE OF BENZALDEHYDE LYASE COMPLEXED WITH 2-METHYL-2,4-PENTANEDIOL

Structural Biology Knowledgebase: 2UZ1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.192
  • R-Value Work: 0.167

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2UZ1

Classification: LYASE

Total Structure Weight: 237962.57

Macromolecule Entities
Molecule Chains Length Organism Details
BENZALDEHYDE LYASE A, D 563 Pseudomonas fluorescens EC#: 4.1.2.38 IUBMB
Gene Name(s): bznB
BENZALDEHYDE LYASE B, C 563 Pseudomonas fluorescens EC#: 4.1.2.38 IUBMB
Mutation: L556I
Gene Name(s): bznB

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TPP
Query on TPP

A, B, C, D THIAMINE DIPHOSPHATE
C12 H19 N4 O7 P2 S
AYEKOFBPNLCAJY-UHFFFAOYSA-O
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MPD
Query on MPD

B, C (4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.192
  • R-Value Work: 0.167
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 104.46 α = 90.00
b = 121.60 β = 90.00
c = 162.96 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-04-23
  • Released Date: 2007-07-24
  • Deposition author(s): Maraite, A., Schmidt, T., Ansorge-Schumacher, M.B., Brzozowski, A.M., Grogan, G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4