2P3Z

Crystal structure of L-Rhamnonate dehydratase from Salmonella typhimurium


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.201

Literature

Macromolecules
Sequence Display for 2P3Z

Classification: LYASE

Total Structure Weight: 91996.65

Macromolecule Entities
Molecule Chains Length Organism Details
L-rhamnonate dehydratase A, B 415 Salmonella enterica EC#: 4.2.1.90 IUBMB
Gene Name(s): rhmD yfaW STM2291
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NA
Query on NA

A, B SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.201
  • Space Group: F 4 3 2

Unit Cell:

Length (Å) Angle (°)
a = 272.25 α = 90.00
b = 272.25 β = 90.00
c = 272.25 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-03-10
  • Released Date: 2007-03-20
  • Deposition author(s): Malashkevich, V.N., Sauder, J.M., Dickey, M., Adams, J.M., Burley, S.K., Wasserman, S.R., Gerlt, J., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

Revision History

  • 2008-05-01
    Type: Version format compliance
  • 2011-07-13
    Type: Derived calculations, Version format compliance