2MOX

solution structure of tandem SH3 domain of Sorbin and SH3 domain-containing protein 1


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 1000 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structural investigation of the interaction between the tandem SH3 domains of c-Cbl-associated protein and vinculin

Zhao, D.Wang, X.Peng, J.Wang, C.Li, F.Sun, Q.Zhang, Y.Zhang, J.Cai, G.Zuo, X.Wu, J.Shi, Y.Zhang, Z.Gong, Q.

(2014) J Struct Biol 187: 194-205

  • DOI: https://doi.org/10.1016/j.jsb.2014.05.009
  • Primary Citation of Related Structures:  
    2MOX, 4LN2, 4LNP

  • PubMed Abstract: 

    c-Cbl-associated protein (CAP) is an important cytoskeletal adaptor protein involved in the regulation of adhesion turnover. The interaction between CAP and vinculin is critical for the recruitment of CAP to focal adhesions. The tandem SH3 domains (herein termed SH3a and SH3b) of CAP are responsible for its interaction with vinculin. However, the structural mechanism underlying the interaction between CAP and vinculin is poorly understood. In this manuscript, we report the solution structure of the tandem SH3 domains of CAP. Our NMR and ITC data indicate that the SH3a and SH3b domains of CAP simultaneously bind to a long proline-rich region of vinculin with different binding specificities. Furthermore, the crystal structures of the individual SH3a and SH3b domains complexed with their substrate peptides indicate that Q807(SH3a) and D881(SH3b) are the critical residues determining the different binding specificities of the SH3 domains. Based on the obtained structural information, a model of the SH3ab-vinculin complex was generated using MD simulation and SAXS data.


  • Organizational Affiliation

    Hefei National Laboratory for Physical Sciences at Microscale and School of Life Sciences, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Sorbin and SH3 domain-containing protein 1143Homo sapiensMutation(s): 0 
Gene Names: SORBS1KIAA0894KIAA1296SH3D5
UniProt & NIH Common Fund Data Resources
Find proteins for Q9BX66 (Homo sapiens)
Explore Q9BX66 
Go to UniProtKB:  Q9BX66
PHAROS:  Q9BX66
GTEx:  ENSG00000095637 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9BX66
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 1000 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2014-05-28
    Type: Initial release
  • Version 1.1: 2014-12-10
    Changes: Database references
  • Version 1.2: 2023-06-14
    Changes: Data collection, Database references, Other