2IC8

Crystal structure of GlpG

Structural Biology Knowledgebase: 2IC8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.236

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2IC8

Classification: MEMBRANE PROTEIN

Total Structure Weight: 24205.22

Macromolecule Entities
Molecule Chains Length Organism Details
Protein glpG A 182 Escherichia coli EC#: 3.4.21.105 IUBMB
Fragment: residues 92-272
Gene Name(s): glpG b3424 JW5687
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: ALPHA-HELICAL

Subgroup Name: Intramembrane Proteases

Protein Name: GlpG rhomboid-family intramembrane protease


Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BNG
Query on BNG

A B-NONYLGLUCOSIDE
C15 H30 O6
QFAPUKLCALRPLH-UXXRCYHCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.236
  • Space Group: H 3 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 110.82 α = 90.00
b = 110.82 β = 90.00
c = 127.61 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-09-12
  • Released Date: 2006-10-17
  • Deposition author(s): Ha, Y.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4