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Crystal structure of mouse Peptide N-Glycanase C-terminal domain in complex with mannopentaose
 
 
DOI:10.2210/pdb2i74/pdb
2I74
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 45934.92
     
    Molecule:PNGase
    Polymer:1Type:polypeptide(L)Length:189
    Chains:A, B
    EC#:3.5.1.52 Go to IUBMB EC entry  
    Fragment:C-terminal domain, residues 471-651
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Mus musculus Go to NCBI Taxonomy entry Common Name: House mouse Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    2G9F  2G9F is the crystal structure of intein-tagged mouse PNGase C-terminal domain determined at 1.90 angstrom resolution 
    2G9G  2G9G is the crystal structure of His-tagged mouse PNGase C-terminal domain determined at 2.00 angstrom resolution 
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    ACT     ACETATE ION C2 H3 O2 3DLigand Explorer Link out to Ligand Expos:ACT Link out to SuperLigands:ACT Link out to SuperHapten:ACT
    GOL     GLYCEROL C3 H8 O3 3DLigand Explorer Link out to Ligand Expos:GOL Link out to SuperLigands:GOL Link out to SuperHapten:GOL
    MAN     ALPHA-D-MANNOSE C6 H12 O6 3DLigand Explorer Link out to Ligand Expos:MAN Link out to SuperLigands:MAN Link out to SuperHapten:MAN
     
     
  •  
    Move Section Derived Data Hide
     
     
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< Biological Assembly 1    Help >
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Biological assembly 1 assigned by authors
 
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Zhou, X.,   Zhao, G.,   Wang, L.,   Li, G.,   Lennarz, W.J.,   Schindelin, H.

    Deposition:   2006-08-30
    Release:   2006-10-24
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 1.75
    R-Value: 0.172 (work)
    R-Free: 0.208
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 45.71 α = 90.00 
    b = 41.65 β = 94.89 
    c = 94.90 γ = 90.00