2HZI

Abl kinase domain in complex with PD180970

Structural Biology Knowledgebase: 2HZI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.176

Literature

Macromolecules
Sequence Display for 2HZI

Classification: TRANSFERASE

Total Structure Weight: 64960.35

Macromolecule Entities
Molecule Chains Length Organism Details
Proto-oncogene tyrosine-protein kinase ABL1 A, B 277 Homo sapiens EC#: 2.7.10.2 IUBMB
Gene Name(s): ABL1 Gene View ABL JTK7
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
JIN
Query on JIN

A, B 6-(2,6-DICHLOROPHENYL)-2-[(4-FLUORO-3-METHYLPHENYL)AMINO]- 8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE
PD180970 (Synonym)
C21 H15 Cl2 F N4 O
SLCFEJAMCRLYRG-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
JIN Kd: 0.7 - 600 nM (99) BindingDB

IC50: 70 nM  BindingMOAD
IC50: 70 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.176
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 106.47 α = 90.00
b = 131.53 β = 90.00
c = 56.46 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-08-09
  • Released Date: 2007-01-16
  • Deposition author(s): Cowan-Jacob, S.W., Fendrich, G., Liebetanz, J., Fabbro, D., Manley, P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4