2HIL

Structure of the Neisseria gonorrhoeae Type IV pilus filament from x-ray crystallography and electron cryomicroscopy


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 12.5 Å
  • Aggregation State: Filament
  • Reconstruction Method: Helical

Literature

Macromolecules
Sequence Display for 2HIL

Classification: CELL ADHESION

Total Structure Weight: 320291.50

Macromolecule Entities
Molecule Chains Length Organism Details
Fimbrial protein A, B, C..., D, E, F, G, H, I, J, K, L, M, N, O, P, Q, RA, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R 158 Neisseria gonorrhoeae Mutation: P69S, S71T
Gene Name(s): pilE1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DT6
Query on DT6

A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R 2,4-bis(acetylamino)-2,4-dideoxy-beta-D-glucopyranose
C10 H18 N2 O6
VNVBLPSANNIIQI-GRDBIXFFSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GLA
Query on GLA

A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R ALPHA D-GALACTOSE
C6 H12 O6
WQZGKKKJIJFFOK-PHYPRBDBSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
OPE
Query on OPE

A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
COLAMINE PHOSPHORIC ACID (Synonym)
C2 H8 N O4 P
SUHOOTKUPISOBE-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MEA
Query on MEA
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R L-PEPTIDE LINKING C10 H13 N O2 PHE

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 12.5 Å
  • Reconstruction Method: Helical

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-06-29
  • Released Date: 2006-09-12
  • Deposition author(s): Craig, L., Volkmann, N., Egelman, E.H., Tainer, J.A.

Revision History

  • 2008-05-01
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance