2HHJ

Human bisphosphoglycerate mutase complexed with 2,3-bisphosphoglycerate (15 days)

Structural Biology Knowledgebase: 2HHJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.209
  • R-Value Work: 0.182

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2HHJ

Classification: ISOMERASE

Total Structure Weight: 63399.57

Macromolecule Entities
Molecule Chains Length Organism Details
Bisphosphoglycerate mutase A, B 267 Homo sapiens EC#: 5.4.2.4 IUBMB
Gene Name(s): BPGM Gene View

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DG2
Query on DG2

A, B 2,3-DIPHOSPHOGLYCERIC ACID
C3 H8 O10 P2
XOHUEYCVLUUEJJ-UWTATZPHSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
3PG
Query on 3PG

A, B 3-PHOSPHOGLYCERIC ACID
C3 H7 O7 P
OSJPPGNTCRNQQC-UWTATZPHSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
HAI
Query on HAI

A CYCLOHEXYLAMMONIUM ION
C6 H14 N
PAFZNILMFXTMIY-UHFFFAOYSA-O
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
NEP
Query on NEP
A, B L-PEPTIDE LINKING C6 H10 N3 O5 P HIS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.209
  • R-Value Work: 0.182
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 48.69 α = 90.00
b = 71.56 β = 90.00
c = 159.19 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-06-28
  • Released Date: 2006-10-24
  • Deposition author(s): Wang, Y., Gong, W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4