2CBN

Crystal structure of ZipD from Escherichia coli


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.230

Literature

Macromolecules
Sequence Display for 2CBN

Classification: HYDROLASE

Total Structure Weight: 33096.32

Macromolecule Entities
Molecule Chains Length Organism Details
RIBONUCLEASE Z A 306 Escherichia coli EC#: 3.1.26.11 IUBMB
Mutation: E2N
Gene Name(s): rbn elaC rnz b2268 JW2263
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.230
  • Space Group: P 64 2 2

Unit Cell:

Length (Å) Angle (°)
a = 147.20 α = 90.00
b = 147.20 β = 90.00
c = 138.20 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-01-06
  • Released Date: 2006-02-15
  • Deposition author(s): Pohl, E., Meyer-Klaucke, W., Kostelecky, B.

Revision History

  • Version 1_0: 2006-02-15

    Type: Initial release

  • Version 1_1: 2014-02-05

    Type: Derived calculations, Refinement description, Version format compliance