2AS8

Crystal structure of mature and fully active Der p 1 allergen


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.185

Literature

Macromolecules
Sequence Display for 2AS8

Classification: HYDROLASE

Total Structure Weight: 50106.27

Macromolecule Entities
Molecule Chains Length Organism Details
Major mite fecal allergen Der p 1 A, B 222 Dermatophagoides pteronyssinus EC#: 3.4.22.65 IUBMB
Mutation: N52Q, V124A
Gene Name(s): DERP1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.185
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 75.12 α = 90.00
b = 78.43 β = 90.00
c = 83.77 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-08-23
  • Released Date: 2005-12-06
  • Deposition author(s): de Halleux, S., Stura, E., VanderElst, L., Carlier, V., Jacquemin, M., Saint-Remy, J.-M.

Revision History

  • Version 1_0: 2005-12-06

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-10-11

    Type: Refinement description