2AS8

Crystal structure of mature and fully active Der p 1 allergen

Structural Biology Knowledgebase: 2AS8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.185

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2AS8

Classification: Hydrolase

Total Structure Weight: 50106.60

Macromolecule Entities
Molecule Chains Length Organism Details
Major mite fecal allergen Der p 1 A, B 222 Dermatophagoides pteronyssinus EC#: 3.4.22.65 IUBMB
Mutation: N52Q, V124A
Gene Name(s): DERP1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.185
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 75.12 α = 90.00
b = 78.43 β = 90.00
c = 83.77 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-08-23
  • Released Date: 2005-12-06
  • Deposition author(s): de Halleux, S., Stura, E., VanderElst, L., Carlier, V., Jacquemin, M., Saint-Remy, J.-M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4