2AKZ

Fluoride Inhibition of Enolase: Crystal Structure of the Inhibitory Complex

Structural Biology Knowledgebase: 2AKZ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.36 Å
  • R-Value Free: 0.144
  • R-Value Work: 0.110

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2AKZ

Classification: LYASE

Total Structure Weight: 96522.46

Macromolecule Entities
Molecule Chains Length Organism Details
Gamma enolase A, B 439 Homo sapiens EC#: 4.2.1.11 IUBMB
Details: inhibitory complex
Gene Name(s): ENO2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TRS
Query on TRS

A 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER (Synonym)
C4 H12 N O3
LENZDBCJOHFCAS-UHFFFAOYSA-O
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

A, B PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
F
Query on F

A, B FLUORIDE ION
F
KRHYYFGTRYWZRS-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.36 Å
  • R-Value Free: 0.144
  • R-Value Work: 0.110
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 109.01 α = 90.00
b = 118.51 β = 90.00
c = 67.19 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-08-04
  • Released Date: 2006-03-21
  • Deposition author(s): Qin, J., Chai, G., Brewer, J.M., Lovelace, L.L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4