2XNV

ACETYLCHOLINE BINDING PROTEIN (ACHBP) AS TEMPLATE FOR HIERARCHICAL IN SILICO SCREENING PROCEDURES TO IDENTIFY STRUCTURALLY NOVEL LIGANDS FOR THE NICOTINIC RECEPTORS

Structural Biology Knowledgebase: 2XNV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.44 Å
  • R-Value Free: 0.212
  • R-Value Work: 0.179

Literature

Macromolecules
Sequence Display for 2XNV

Classification: RECEPTOR

Total Structure Weight: 269505.81

Macromolecule Entities
Molecule Chains Length Organism Details
SOLUBLE ACETYLCHOLINE RECEPTOR A, B, C..., D, E, F, G, H, I, JA, B, C, D, E, F, G, H, I, J 236 Aplysia californica Mutation: A41V, A136V
Details: COMPOUND 6 FROM IN SILICO SCREEN
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
VU3
Query on VU3

A, B, C, D, E, F, G, H, I, J 2-(2-(4-PHENYLPIPERIDIN-1-YL)ETHYL)-1H-INDOLE
C21 H24 N2
PXWYOBGHDFLUNG-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
VU3 N/A in BindingDB
Ki: 5000 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.44 Å
  • R-Value Free: 0.212
  • R-Value Work: 0.179
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 145.14 α = 90.00
b = 145.14 β = 90.00
c = 269.76 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-08-06
  • Released Date: 2011-08-24
  • Deposition author(s): Rucktooa, P., Akdemir, A., Deesch, I., Sixma, T.K.

Revision History

  • 2011-10-12
    Type: Citation | Details: JRNL