2X9J

Structure of the Mutant D206N of Phycoerythrobilin Synthase PebS from the Cyanophage P-SSM2 in complex with bound substrate Biliverdin IXA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.157

Literature

Macromolecules
Sequence Display for 2X9J

Classification: OXIDOREDUCTASE

Total Structure Weight: 55749.00

Macromolecule Entities
Molecule Chains Length Organism Details
PHYCOERYTHROBILIN SYNTHASE A, B 233 Prochlorococcus phage p-ssm2 EC#: 1.3.7.6 IUBMB
Mutation: D206N
Gene Name(s): pebS PSSM2_058
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BLA
Query on BLA

A, B BILIVERDINE IX ALPHA
C33 H34 N4 O6
GWZYPXHJIZCRAJ-SRVCBVSDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.157
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 53.81 α = 90.00
b = 63.15 β = 108.53
c = 81.65 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-03-21
  • Released Date: 2010-11-17
  • Deposition author(s): Busch, A.W.U., Frankenberg-Dinkel, N., Hofmann, E.

Revision History

  • Version 1_0: 2010-11-17

    Type: Initial release

  • Version 1_1: 2011-05-19

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance