2WGF

Crystal structure of Mycobacterium tuberculosis C171Q KasA variant

Structural Biology Knowledgebase: 2WGF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.211
  • R-Value Work: 0.166

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2WGF

Classification: TRANSFERASE

Total Structure Weight: 348732.75

Macromolecule Entities
Molecule Chains Length Organism Details
3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 1 A, B, C..., D, E, F, G, HA, B, C, D, E, F, G, H 416 Mycobacterium tuberculosis EC#: 2.3.1.41 IUBMB
Mutation: C171Q
Gene Name(s): kasA Rv2245 MTCY427.26
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PG4
Query on PG4

A, B, C, D, E, F TETRAETHYLENE GLYCOL
C8 H18 O5
UWHCKJMYHZGTIT-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PEG
Query on PEG

D DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A, B, C, D, E, F, G, H SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.211
  • R-Value Work: 0.166
  • Space Group: P 31

Unit Cell:

Length (Å) Angle (°)
a = 151.51 α = 90.00
b = 151.51 β = 90.00
c = 147.84 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-04-17
  • Released Date: 2009-07-21
  • Deposition author(s): Luckner, S.R., Kisker, C.

Revision History

  • 2012-04-11
    Type: Refinement description | Details: REMARK 3
  • 2012-04-11
    Type: Non-polymer description | Details: FORMUL
  • 2012-04-11
    Type: Other | Details: REMARK 525
  • 2012-04-11
    Type: Geometry validation | Details: REMARK 500
  • 2012-04-11
    Type: Citation | Details: JRNL
  • 2012-04-11
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2012-04-11
    Type: Version format compliance | Details: REMARK 4