2QGN

Crystal structure of tRNA isopentenylpyrophosphate transferase (BH2366) from Bacillus halodurans, Northeast Structural Genomics Consortium target BhR41.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.225

Literature

Macromolecules
Sequence Display for 2QGN

Classification: TRANSFERASE

Total Structure Weight: 37498.90

Macromolecule Entities
Molecule Chains Length Organism Details
tRNA delta(2)-isopentenylpyrophosphate transferase A 322 Bacillus halodurans EC#: 2.5.1.75 IUBMB
Mutation: M1M, M22M, M37M, M43M, M55M, M194M, M199M, M215M, M246M, M289M, M299M
Gene Name(s): miaA BH2366
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.225
  • Space Group: P 61

Unit Cell:

Length (Å) Angle (°)
a = 50.85 α = 90.00
b = 50.85 β = 90.00
c = 204.70 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-06-29
  • Released Date: 2007-07-17
  • Deposition author(s): Forouhar, F., Neely, H., Abashidze, M., Seetharaman, J., Shastry, R., Janjua, H., Cunningham, K., Ma, L-C., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

Revision History

  • 2008-05-01
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance