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Ternary complex of profilin-actin with the poly-PRO-GAB domain of VASP*
2PBD
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Structural Protein
    Structure Weight: 61473.09
    Molecule: Actin, alpha skeletal muscle
    Polymer: 1 Type: protein Length: 377
    Chains: A
    Fragment: residues 1-377
    Organism: Oryctolagus cuniculus
    Gene Names: Gene View for ACTA1 ACTA
    UniProtKB: Protein Feature View | Search PDB | P68135  
    Molecule: Profilin-1
    Polymer: 2 Type: protein Length: 139
    Chains: P
    Fragment: residues 2-140
    Organism: Homo sapiens
    Gene Name: Gene View for PFN1
    UniProtKB: Protein Feature View | Search PDB | P07737  
    Molecule: Vasodilator-stimulated phosphoprotein
    Polymer: 3 Type: protein Length: 43
    Chains: V
    Fragment: VASP Loading Poly-Pro Site and GAB domain
    Organism: Homo sapiens
    Gene Name: Gene View for VASP
    UniProtKB: Protein Feature View | Search PDB | P50552  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Oryctolagus cuniculus   Taxonomy   Common Name: Rabbit  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli bl21(de3)  
    Polymer: 3
    Scientific Name: Synthetic construct (Homo sapiens)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    2PAV  Ternary complex of Profilin actin and VASP Loading Poly-Pro Site 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ATP
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    ATP C10 H16 N5 O13 P3
    ADENOSINE-5'-TRIPHOSPHATE
    ATP:2PBD
    CA
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    CA Ca
    CALCIUM ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    HIC
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    HIC C7 H11 N3 O2 HIS lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Ferron, F.,  Rebowski, G.,  Dominguez, R.

    Deposition:   2007-03-28
    Release:   2007-11-13
    Last Modified (REVDAT):   2013-03-06
     
  •   Revision History    Hide
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    2013-03-06
    Other
    2013-03-06
    Flag residual B-value
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.50
    R-Value: 0.158 (obs.)
    R-Free: 0.190
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 119.09 α = 90.00 
    b = 56.59 β = 104.75 
    c = 75.23 γ = 90.00